metacoder: Tools for Parsing, Manipulating, and Graphing Taxonomic Abundance Data

A set of tools for parsing, manipulating, and graphing data classified by a hierarchy (e.g. a taxonomy).

Version: 0.3.7
Depends: R (≥ 3.0.2)
Imports: stringr, ggplot2, igraph, grid, taxize, seqinr, RCurl, ape, stats, grDevices, utils, lazyeval, dplyr, magrittr, readr, rlang, ggfittext, vegan, cowplot, GA, Rcpp, crayon, tibble, R6
LinkingTo: Rcpp
Suggests: knitr, rmarkdown, testthat, zlibbioc, BiocManager, phyloseq, phylotate, traits, biomformat, DESeq2
Published: 2024-02-20
DOI: 10.32614/CRAN.package.metacoder
Author: Zachary Foster [aut, cre], Niklaus Grunwald [ths], Rob Gilmore [ctb]
Maintainer: Zachary Foster <zacharyfoster1989 at>
License: GPL-2 | GPL-3
NeedsCompilation: yes
Citation: metacoder citation info
Materials: README NEWS
In views: Phylogenetics
CRAN checks: metacoder results


Reference manual: metacoder.pdf
Vignettes: Documentation for metacoder


Package source: metacoder_0.3.7.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): metacoder_0.3.7.tgz, r-oldrel (arm64): metacoder_0.3.7.tgz, r-release (x86_64): metacoder_0.3.7.tgz, r-oldrel (x86_64): metacoder_0.3.7.tgz
Old sources: metacoder archive

Reverse dependencies:

Reverse suggests: MiscMetabar


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