gapmap: Drawing Gapped Cluster Heatmaps with 'ggplot2'

The gap encodes the distance between clusters and improves interpretation of cluster heatmaps. The gaps can be of the same distance based on a height threshold to cut the dendrogram. Another option is to vary the size of gaps based on the distance between clusters.

Version: 1.0.0
Depends: ggplot2, reshape2
Imports: grid
Suggests: knitr, dendsort, RColorBrewer, rmarkdown
Published: 2024-01-22
DOI: 10.32614/CRAN.package.gapmap
Author: Ryo Sakai [aut], Evan Biederstedt [cre, aut]
Maintainer: Evan Biederstedt <evan.biederstedt at>
License: GPL-2 | GPL-3
NeedsCompilation: no
Materials: README
CRAN checks: gapmap results


Reference manual: gapmap.pdf
Vignettes: "An introduction to the gapmap package"
"Example with a TCGA dataset"


Package source: gapmap_1.0.0.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): gapmap_1.0.0.tgz, r-oldrel (arm64): gapmap_1.0.0.tgz, r-release (x86_64): gapmap_1.0.0.tgz, r-oldrel (x86_64): gapmap_1.0.0.tgz
Old sources: gapmap archive

Reverse dependencies:

Reverse suggests: dendsort


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