DysPIA: Dysregulated Pathway Identification Analysis

It is used to identify dysregulated pathways based on a pre-ranked gene pair list. A fast algorithm is used to make the computation really fast. The data in package 'DysPIAData' is needed.

Version: 1.3
Depends: R (≥ 3.5.0), DysPIAData
Imports: Rcpp (≥ 1.0.4), BiocParallel, fastmatch, data.table, stats, parmigene
LinkingTo: Rcpp
Published: 2020-07-10
DOI: 10.32614/CRAN.package.DysPIA
Author: Limei Wang [aut, cre], Jin Li [aut, ctb]
Maintainer: Limei Wang <lemon619 at gmail.com>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
In views: Omics
CRAN checks: DysPIA results


Reference manual: DysPIA.pdf


Package source: DysPIA_1.3.tar.gz
Windows binaries: r-devel: DysPIA_1.3.zip, r-release: DysPIA_1.3.zip, r-oldrel: DysPIA_1.3.zip
macOS binaries: r-release (arm64): DysPIA_1.3.tgz, r-oldrel (arm64): DysPIA_1.3.tgz, r-release (x86_64): DysPIA_1.3.tgz, r-oldrel (x86_64): DysPIA_1.3.tgz
Old sources: DysPIA archive


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