ComICS: Computational Methods for Immune Cell-Type Subsets

Provided are Computational methods for Immune Cell-type Subsets, including:(1) DCQ (Digital Cell Quantifier) to infer global dynamic changes in immune cell quantities within a complex tissue; and (2) VoCAL (Variation of Cell-type Abundance Loci) a deconvolution-based method that utilizes transcriptome data to infer the quantities of immune-cell types, and then uses these quantitative traits to uncover the underlying DNA loci.

Version: 1.0.4
Depends: R (≥ 3.1.1)
Imports: glmnet, stats
Published: 2018-05-13
DOI: 10.32614/CRAN.package.ComICS
Author: Yael Steuerman [aut, cre], Irit Gat-Viks [aut]
Maintainer: Yael Steuerman <yaelsteu at>
License: GPL-2
URL: ,
NeedsCompilation: no
CRAN checks: ComICS results


Reference manual: ComICS.pdf


Package source: ComICS_1.0.4.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): ComICS_1.0.4.tgz, r-oldrel (arm64): ComICS_1.0.4.tgz, r-release (x86_64): ComICS_1.0.4.tgz, r-oldrel (x86_64): ComICS_1.0.4.tgz
Old sources: ComICS archive

Reverse dependencies:

Reverse imports: ADAPTS


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