AlphaPart: Partition/Decomposition of Breeding Values by Paths of Information

A software that implements a method for partitioning genetic trends to quantify the sources of genetic gain in breeding programmes. The partitioning method is described in Garcia-Cortes et al. (2008) <doi:10.1017/S175173110800205X>. The package includes the main function AlphaPart for partitioning breeding values and auxiliary functions for manipulating data and summarizing, visualizing, and saving results.

Version: 0.9.8
Depends: R (≥ 3.5.0)
Imports: directlabels (≥ 1.1), ggplot2 (≥ 0.8.9), pedigree (≥ 1.3.1), Rcpp (≥ 0.9.4), methods (≥ 3.6.2), reshape, dplyr, magrittr, tibble (≥ 3.1.7)
LinkingTo: Rcpp
Suggests: RColorBrewer (≥ 1.0-2), truncnorm (≥ 1.0-5), knitr, rmarkdown, testthat (≥ 3.0.0), covr, ggridges (≥ 0.5.3)
Published: 2022-11-15
DOI: 10.32614/CRAN.package.AlphaPart
Author: Gregor Gorjanc ORCID iD [aut, cre], Jana Obsteter ORCID iD [aut], Thiago de Paula Oliveira ORCID iD [aut]
Maintainer: Gregor Gorjanc <highlander.research.lab at>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
NeedsCompilation: yes
CRAN checks: AlphaPart results


Reference manual: AlphaPart.pdf
Vignettes: PartitioningVariance


Package source: AlphaPart_0.9.8.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): AlphaPart_0.9.8.tgz, r-oldrel (arm64): AlphaPart_0.9.8.tgz, r-release (x86_64): AlphaPart_0.9.8.tgz, r-oldrel (x86_64): AlphaPart_0.9.8.tgz
Old sources: AlphaPart archive


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