ontoFAST: Interactive Annotation of Characters with Biological Ontologies

Tools for annotating characters (character matrices) with anatomical and phenotype ontologies. Includes functions for visualising character annotations and creating simple queries using ontological relationships.

Version: 1.0.0
Depends: R (≥ 3.5), shiny, ontologyIndex, visNetwork
Imports: shinydashboard, pbapply, stringr, utils, stats, dplyr, plyr, sunburstR, usethis
Suggests: knitr, rmarkdown
Published: 2021-04-29
DOI: 10.32614/CRAN.package.ontoFAST
Author: Sergei Tarasov
Maintainer: Sergei Tarasov <sergei.tarasov at helsinki.fi>
License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
URL: https://github.com/sergeitarasov/ontoFAST
NeedsCompilation: no
CRAN checks: ontoFAST results


Reference manual: ontoFAST.pdf


Package source: ontoFAST_1.0.0.tar.gz
Windows binaries: r-devel: ontoFAST_1.0.0.zip, r-release: ontoFAST_1.0.0.zip, r-oldrel: ontoFAST_1.0.0.zip
macOS binaries: r-release (arm64): ontoFAST_1.0.0.tgz, r-oldrel (arm64): ontoFAST_1.0.0.tgz, r-release (x86_64): ontoFAST_1.0.0.tgz, r-oldrel (x86_64): ontoFAST_1.0.0.tgz


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