The goal of SiPhyNetwork is to generate Phylogenetic networks in a process-based manner. SiPhyNetwork considers a birth-death-hybridization proccess for simulating Networks. We allow for hybridization to be lineage generative, lineage degenerative, and lineage neutral.


You can install the development version from GitHub with:

# install.packages("devtools")

See the Rmarkdown labelled Introduction.rmd in the vignette folder to see how to use the package