MEGENA: Multiscale Clustering of Geometrical Network

Co-Expression Network Analysis by adopting network embedding technique. Song W.-M., Zhang B. (2015) Multiscale Embedded Gene Co-expression Network Analysis. PLoS Comput Biol 11(11): e1004574. <doi:10.1371/journal.pcbi.1004574>.

Version: 1.3.7
Depends: R (≥ 3.4.0), doParallel (≥ 1.0.11), foreach (≥ 1.4.4), igraph (≥ 1.2.1)
Imports: Rcpp (≥ 0.11.3), Matrix (≥ 1.1-5), ggplot2 (≥ 1.0.0), reshape (≥ 0.8.5), fpc (≥ 2.1-11), cluster (≥ 2.0.7-1), ggrepel (≥ 0.5), ggraph (≥ 1.0.1)
LinkingTo: Rcpp, BH
Suggests: knitr, rmarkdown
Published: 2018-09-10
DOI: 10.32614/CRAN.package.MEGENA
Author: Won-Min Song, Bin Zhang
Maintainer: Won-Min Song <wonmin1984 at>
License: GPL (≥ 3)
NeedsCompilation: yes
Materials: README
CRAN checks: MEGENA results


Reference manual: MEGENA.pdf
Vignettes: MEGENA pipeline overview


Package source: MEGENA_1.3.7.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): MEGENA_1.3.7.tgz, r-oldrel (arm64): MEGENA_1.3.7.tgz, r-release (x86_64): MEGENA_1.3.7.tgz, r-oldrel (x86_64): MEGENA_1.3.7.tgz
Old sources: MEGENA archive

Reverse dependencies:

Reverse imports: DDPNA


Please use the canonical form to link to this page.