HMP: Hypothesis Testing and Power Calculations for Comparing Metagenomic Samples from HMP

Using Dirichlet-Multinomial distribution to provide several functions for formal hypothesis testing, power and sample size calculations for human microbiome experiments.

Version: 2.0.1
Depends: R (≥ 3.1.0), dirmult
Imports: ggplot2, stats, foreach, doParallel, MASS, vegan, gplots, rpart, rpart.plot, parallel, graphics, lattice
Published: 2019-08-31
DOI: 10.32614/CRAN.package.HMP
Author: Patricio S. La Rosa, Elena Deych, Sharina Carter, Berkley Shands, Dake Yang, William D. Shannon
Maintainer: Berkley Shands <rpackages at>
License: Apache License (== 2.0)
NeedsCompilation: no
Materials: NEWS
CRAN checks: HMP results


Reference manual: HMP.pdf
Vignettes: Figures from Reference Paper


Package source: HMP_2.0.1.tar.gz
Windows binaries: r-devel:, r-release:, r-oldrel:
macOS binaries: r-release (arm64): HMP_2.0.1.tgz, r-oldrel (arm64): HMP_2.0.1.tgz, r-release (x86_64): HMP_2.0.1.tgz, r-oldrel (x86_64): HMP_2.0.1.tgz
Old sources: HMP archive

Reverse dependencies:

Reverse imports: HMPTrees


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