BayesDLMfMRI: Statistical Analysis for Task-Based Fmri Data

The 'BayesDLMfMRI' package performs statistical analysis for task-based functional magnetic resonance imaging (fMRI) data at both individual and group levels. The analysis to detect brain activation at the individual level is based on modeling the fMRI signal using Matrix-Variate Dynamic Linear Models (MDLM). The analysis for the group stage is based on posterior distributions of the state parameter obtained from the modeling at the individual level. In this way, this package offers several R functions with different algorithms to perform inference on the state parameter to assess brain activation for both individual and group stages. Those functions allow for parallel computation when the analysis is performed for the entire brain as well as analysis at specific voxels when it is required. References: Cardona-Jiménez (2021) <doi:10.1016/j.csda.2021.107297>; Cardona-Jiménez (2021) <doi:10.48550/arXiv.2111.01318>.

Version: 0.0.3
Depends: R (≥ 3.5.0)
Imports: abind, oro.nifti, neurobase, pbapply, Rcpp (≥ 1.0.4), Rdpack, mathjaxr
LinkingTo: Rcpp, RcppArmadillo, RcppDist
Suggests: rmarkdown, knitr, testthat (≥ 3.0.0)
Published: 2023-09-09
DOI: NA
Author: Johnatan Cardona-Jiménez [aut], Carlos Pérez [cre, aut], Isabel Ramírez [aut]
Maintainer: Carlos Pérez <caaperezag at unal.edu.co>
License: GPL-2
URL: https://github.com/JohnatanLAB/BayesDLMfMRI/
NeedsCompilation: yes
SystemRequirements: C++17
Materials: README
CRAN checks: BayesDLMfMRI results

Documentation:

Reference manual: BayesDLMfMRI.pdf
Vignettes: Group_analysis
Individual_analysis

Downloads:

Package source: BayesDLMfMRI_0.0.3.tar.gz
Windows binaries: r-devel: BayesDLMfMRI_0.0.3.zip, r-release: BayesDLMfMRI_0.0.3.zip, r-oldrel: BayesDLMfMRI_0.0.3.zip
macOS binaries: r-release (arm64): BayesDLMfMRI_0.0.3.tgz, r-oldrel (arm64): BayesDLMfMRI_0.0.3.tgz, r-release (x86_64): BayesDLMfMRI_0.0.3.tgz, r-oldrel (x86_64): BayesDLMfMRI_0.0.3.tgz
Old sources: BayesDLMfMRI archive

Linking:

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