CRAN Package Check Results for Package kpcalg

Last updated on 2024-07-25 06:52:18 CEST.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 1.0.1 19.37 258.74 278.11 NOTE
r-devel-linux-x86_64-debian-gcc 1.0.1 12.29 221.04 233.33 NOTE
r-devel-linux-x86_64-fedora-clang 1.0.1 367.06 NOTE
r-devel-linux-x86_64-fedora-gcc 1.0.1 376.94 NOTE
r-devel-windows-x86_64 1.0.1 15.00 213.00 228.00 NOTE
r-patched-linux-x86_64 1.0.1 19.18 271.52 290.70 NOTE
r-release-linux-x86_64 1.0.1 14.53 284.49 299.02 NOTE
r-release-macos-arm64 1.0.1 113.00 NOTE
r-release-macos-x86_64 1.0.1 186.00 WARN
r-release-windows-x86_64 1.0.1 14.00 223.00 237.00 NOTE
r-oldrel-macos-arm64 1.0.1 99.00 NOTE
r-oldrel-macos-x86_64 1.0.1 221.00 NOTE
r-oldrel-windows-x86_64 1.0.1 18.00 281.00 299.00 NOTE

Additional issues

noSuggests

Check Details

Version: 1.0.1
Check: Rd files
Result: NOTE checkRd: (-1) hsic.perm.Rd:36: Lost braces; missing escapes or markup? 36 | Let x and y be two samples of length n. Gram matrices K and L are defined as: \eqn{K_{i,j} = \exp\frac{(x_i-x_j)^2}{\sigma^2}}{K_{i,j} =exp((x_i-x_j)^2/sig^2)} and \eqn{L_{i,j} = \exp\frac{(y_i-y_j)^2}{\sigma^2}}{L_{i,j} =exp((y_i-y_j)^2/sig^2)}. \eqn{H_{i,j} = \delta_{i,j} - \frac{1}{n}}{H_{i,j} = \delta_{i,j} - 1/n}. Let \eqn{A=HKH} and \eqn{B=HLH}, then \eqn{HSIC(x,y)=\frac{1}{n^2}Tr(AB)}{HSIC(x,y)=Tr(AB)/n^2}. Permutation test permutes y p times to get \eqn{y_{(p)}} and calculates HSIC(x,y_{(p)}). \eqn{pval = \frac{1(HSIC(x,y)>HSIC(x,y_{(p)}))}{p}}{(HSIC(x,y)>HSIC(x,y_{(p)}))/p}. | ^ Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64

Version: 1.0.1
Check: LazyData
Result: NOTE 'LazyData' is specified without a 'data' directory Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64

Version: 1.0.1
Check: Rd cross-references
Result: NOTE Found the following Rd file(s) with Rd \link{} targets missing package anchors: dcov.gamma.Rd: dcov.test frml.additive.smooth.Rd: gam frml.full.smooth.Rd: gam kernelCItest.Rd: skeleton, pc kpc.Rd: pc, dcov.test, udag2pdag, pcAlgo regrVonPS.Rd: gam regrXonS.Rd: gam Please provide package anchors for all Rd \link{} targets not in the package itself and the base packages. Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64

Version: 1.0.1
Check: re-building of vignette outputs
Result: WARN Error(s) in re-building vignettes: ... --- re-building ‘kpcalg_tutorial.Rnw’ using knitr Error: processing vignette 'kpcalg_tutorial.Rnw' failed with diagnostics: Running 'texi2dvi' on 'kpcalg_tutorial.tex' failed. LaTeX errors: ! Undefined control sequence. l.84 \hlkwd{library}\hldef {(energy)} ? ! Emergency stop. ! Emergency stop. l.84 End of file on the terminal! ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘kpcalg_tutorial.Rnw’ SUMMARY: processing the following file failed: ‘kpcalg_tutorial.Rnw’ Error: Vignette re-building failed. Execution halted Flavor: r-release-macos-x86_64